基本情況

舒龍飛，湖北黃岡人，九三學社社員，太阳集团app首页逸仙學者，教授，博士生導師，廣東省傑出青年基金、美國生命科學基金獲得者。獲國際社會性阿米巴學會青年教職獎International Dictyostelium Junior Faculty award（2024年）、廣東省環境科學學會生态環境青年科技獎（2024年）等獎勵。

課題組聚焦環境阿米巴研究、形成了獨具特色的學術标簽。研究體系獲國家級及國際科研計劃持續資助，主持了2項國家自然科學基金，以及廣東省傑青、美國生命科學基金、歐洲進化學會等7項國内外項目。發表SCI論文83篇，H指數29。其中一作/通訊37篇（中科院一區26篇，自然指數論文10篇），包括ISME J.（2篇），Environ. Sci. Technol.（5篇），Water Res.（2篇），eLife（1篇）等領域重要學術期刊。現任國際水協會（IWA）水生物安全中國委員會委員，歐洲環境、生态與可持續發展華人學會青年理事，擔任BMC Microbiology（JCR Q1）編委，《水生生物學報》青年編委。擔任ISME J.、PNAS、ES&T、Water Res.等雜志審稿人，參與中國、波蘭、瑞典等國内外基金項目評審。

 

研究方向

圍繞原生動物阿米巴開展環境生物學相關研究，主要關注以下問題：

  • 方法：分離培養、檢測、物種和遺傳資源庫等技術問題；
  • 原理：共生、捕食、協同進化等理論問題；
  • 應用：生物安全、生物控制、生态修複等應用問題。

 

 

課題組專門緻力于環境阿米巴研究，目标成為特色鮮明、在國内外有一定知名度的阿米巴實驗室。歡迎對環境、生态、微生物、環境工程、進化、生物學等學科感興趣的本科生、碩士、博士、博士後與研究員加盟。

我們的團隊互相尊重、高效友愛、靈魂有趣。

 

聯系方式

-地址：廣州市大學城外環東路132号太阳集团1088vip

-郵編：510006

-Email：shulf@mail.sysu.edu.cn

 

工作經曆

2025 - 至今，太阳集团app首页，教授

2024 - 至今，太阳集团app首页，逸仙學者

2018 - 2025，太阳集团app首页，“百人計劃”副教授

2016 - 2018，華盛頓大學-聖路易斯，美國生命科學基金會Fellow

2015 - 2016，華盛頓大學--聖路易斯，博士後

 

教育經曆

2011 - 2015，蘇黎世聯邦理工學院，環境系統科學系，博士

2008 - 2011，深圳大學，生化與分子生物學，碩士

2004 - 2008，深圳大學，生物技術，學士

 

主持的科研項目

  • 2023 – 2026：廣東省傑出青年基金項目，主持
  • 2022 – 2024：太阳集团app首页“青年拔尖科研人才”培育項目，主持
  • 2021 – 2023：廣州市應用基礎研究項目，主持
  • 2020 – 2023：國家自然科學基金面上項目（31970384），主持
  • 2020 – 2022：國家自然科學基金青年項目（41907021），主持
  • 2019 – 2020：中央高校基本業務費青年培育項目，主持
  • 2018 – 2020：太阳集团app首页“百人計劃”啟動項目，主持
  • 2016 – 2019：Proto-farming and the carried microbiome in a social amoeba, Life Sciences Research Foundation (LSRF, 生命科學基金會, 美國)，主持
  • 2013 – 2014：Popularizing Evolution in China, European Society for Evolutionary Biology (ESEB, 歐洲進化學會).（主持）

 

參與的科研項目

  • 2011 - 2014：瑞士自然科學基金，參與

 

講授課程

太阳集团app首页：走進環境微生物：從入門到實踐

太阳集团app首页：環境生态工程

太阳集团app首页：創新研究與訓練

太阳集团app首页：環境生态技術綜合實驗

華盛頓大學-聖路易斯：Bio 4935

 

代表性論文

  1. Yijing Shi, Lu Ma, Min Zhou, Zhili He, Yuanchen Zhao, Junyue Hong, Xinyue Zou, Lin Zhang, Longfei Shu*. Copper stress shapes the dynamic behavior of amoeba and its associated bacteria. The ISME Journal, 2024, 18(1), wrae100.
  2. Longfei Shu*, Bojie Zhang, David Queller, Joan Strassmann. Burkholderia bacteria use chemotaxis to find social amoeba Dictyostelium discoideum hosts. The ISME Journal, 2018, 12:1977-1993.
  3. Yijing Shi, Minxi Liang, Jiaxiong Zeng, Zihe Wang, Lin Zhang, Zhili He, Mengyuan Li, Longfei Shu*, Guangguo Ying. Soil amoebae are unexpected hotspots of environmental antibiotics and antibiotic resistance genes. Environmental Science & Technology, 2024, 58 (49), 21475-21488.
  4. Yingwen Mai, Jianyi Zheng, Jiaxiong Zeng, Zihe Wang, Fei Liu, Lu Ma, Min Zhou, Shanshan Zhao, Bo Wu, Cheng Wang, Qingyun Yan, Zhili He, Longfei Shu*. Protozoa as Hotspots for Potential Pathogens in the Drinking Water of a Subtropical Megacity: Diversity, Treatment, and Health Risk. Environmental Science & Technology, 2023, 57(15): 6108-6118.
  5. Siyi Zhang, Zhenzhen He, Chenyuan Wu, Zihe Wang, Yingwen Mai, Ruiwen Hu, Xiaojie Zhang, Wei Huang, Yuehui Tian, Dehua Xia, Cheng Wang, Qingyun Yan, Zhili He*, Longfei Shu*. 2022. Complex Bilateral Interactions Determine the Fate of Polystyrene Micro-and Nanoplastics and Soil Protists: Implications from a Soil Amoeba. Environmental Science & Technology, 56(8): 4936-4949.
  6. Huang Yu#, Zhenzhen He#, Zhili He, Qingyun Yan*, Longfei Shu*. Soil amoebae affect iron and chromium reduction through preferential predation between two metal-reducing bacteria. Environmental Science & Technology, 2022, 56, 12, 9052–9062.
  7. Chao Jin, Lingan Zhao, Weigao Zhao, Luting Wang, Shishu Zhu, Zihan Xiao, Yijun Mo, Miaoyue Zhang, Longfei Shu*, Rongliang Qiu*. 2021. Transport and Retention of Free-Living Amoeba Spores in Porous Media: Effects of Operational Parameters and Extracellular Polymeric Substances. Environmental Science & Technology, 2021, 55(13): 8709-8720.
  8. Liping Wang, Yingwen Mai, Shenzhou Li, Longfei Shu*, Jingyun Fang*. Efficient inactivation of amoeba spores and their intraspore bacteria by solar/chlorine: Kinetics and mechanisms. Water Research, 2023,242: 120288.
  9. Yingxue Xuan, Yingwen Mai, Yunqiu Xu, Jianyi Zheng, Zhili He, Longfei Shu*, Yingjie Cao*. Enhanced microbial nitrification-denitrification processes in a subtropical metropolitan river network. Water Research, 2022, 222: 118857.
  10. Longfei Shu#, Debra A Brock#, Katherine S Geist, Jacob W Miller, David C Queller, Joan E Strassmann, Susanne DiSalvo. Symbiont location, host fitness, and possible coadaptation in a symbiosis between social amoebae and bacteria.eLife, 2018, 7: e42660.

 

所有論文

2025

  1. Yuanchen Zhao, Lin Zhang, Zihe Wang, Chenyuan Wu, Fei Liu, Longfei Shu*. Exploring the mechanisms of cadmium tolerance and bioaccumulation in a soil amoeba. Science of The Total Environment, 2025, 965, 178637.
  2. Yuehui Tian, Lin Zhang, Zihe Wang, Zhili He, Longfei Shu*. Light affects host-symbiont dynamics in the non-photosynthetic social amoeba symbiosis, Ecology and Evolution, 2025.
  3. Fei Liu, Jiaxiong Zeng, Jijuan Ding, Cheng Wang, Zhili He, Zhiwei Liu, Longfei Shu*. Microbially-driven phosphorus cycling and its coupling mechanisms with nitrogen cycling in mangrove sediments. Science of The Total Environment, 2025, 958, 178118.
  4. Jijuan Ding, Fei Liu, Jiaxiong Zeng, Hang Gu, Jing Huang, Bo Wu, Longfei Shu, Qingyun Yan, Zhili He, Cheng Wang. Depth heterogeneity of lignin-degrading microbiome and organic carbon processing in mangrove sediments. npj Biofilms and Microbiomes, 2025, 11(1), 5.

2024

  1. Yijing Shi, Minxi Liang, Jiaxiong Zeng, Zihe Wang, Lin Zhang, Zhili He, Mengyuan Li, Longfei Shu*, Guangguo Ying. Soil amoebae are unexpected hotspots of environmental antibiotics and antibiotic resistance genes. Environmental Science & Technology, 2024, 58 (49), 21475-21488.
  2. Huinan Zhao, Jianyi Zheng, Wei Huang, Zhenzhen He, Fan Huang, Lin Zhang, Tao Zhong, Yadi Li, Dehua Xia, Longfei Shu*, Chun He*. “Nano knife”for efficient piezocatalytic inactivation of amoeba spores and their intracellular bacteria: Synergetic effect between physical damage and chemical oxidation. Journal of Hazardous Materials, 2024, 480, 136387.
  3. Yijing Shi, Lu Ma, Min Zhou, Zhili He, Yuanchen Zhao, Junyue Hong, Xinyue Zou, Lin Zhang, Longfei Shu*. Copper stress shapes the dynamic behavior of amoeba and its associated bacteria. The ISME Journal, 2024, 18(1), wrae100.
  4. Fei Liu, Jijuan Ding, Jiaxiong Zeng, Cheng Wang, Bo Wu, Qingyun Yan, Zhili He*, Longfei Shu*. Mangrove sediments are environmental hotspots for pathogenic protists. Journal of Hazardous Materials, 2024, 467: 133643.
  5. Min Zhou, Lu Ma, Zihe Wang, Shicheng Li, Yijun Cai, Meicheng Li, Lin Zhang, Cheng Wang, Bo Wu, Qingyun Yan, Zhili He, Longfei Shu*. Nano-and microplastics drive the dynamic equilibrium of amoeba-associated bacteria and antibiotic resistance genes. Journal of Hazardous Materials, 2024, 476, 134958.
  6. Wei Huang, Yuanchen Zhao, Lin Zhang, Yikun Shi, Zihe Wang, Yingwen Mai, Longfei Shu*. Soil physical structure drives N-glycan mediated trophic interactions in soil amoebae: Mechanisms and environmental implications. Science of The Total Environment, 2024, 906: 167509.
  7. Lu Ma, Lin Zhang, Siyi Zhang, Min Zhou, Wei Huang, Xinyue Zou, Zhili He, Longfei Shu*. Soil protists are more resilient to the combined effect of microplastics and heavy metals than bacterial communities. Science of The Total Environment, 2024, 906: 167645.
  8. Xueqin Yang, Yijing Shi, Guangguo Ying, Mengyuan Li, Zhili He, Longfei Shu*. Cooperation among nitrifying microorganisms promotes the irreversible biotransformation of sulfamonomethoxine. Science of The Total Environment, 2024, 923: 171395.
  9. Zhenyu Huang, Longfei Shu, Zhili He, Qingyun Yan. Community Coalescence under Variable Hydrochemical Conditions of the Chesapeake Bay Shaped Bacterial Diversity and Functional Traits. Environmental Research, 2024, 119272.
  10. Xueqin Yang, Yongjie Wu, Longfei Shu, Hang Gu, Fei Liu, Jijuan Ding, Jiaxiong Zeng, Cheng Wang, Zhili He, Meiying Xu, Feifei Liu, Xiafei Zheng, Bo Wu. Unraveling the important role of comammox Nitrospira to nitrification in the coastal aquaculture system. Frontiers in Microbiology, 2024, 15: 1355859.
  11. Jijuan Ding, Fei Liu, Jiaxiong Zeng, Hang Gu, Dandan Zhang, Xueqin Yang, Bo Wu, Longfei Shu, Zhili He, Cheng Wang. Homologous recombination and gene‐specific selection co‐shape the vertical nucleotide diversity of mangrove sediment microbial populations. Ecology and Evolution, 2024, 14(7), e70040.

2023

  1. Yingwen Mai, Jianyi Zheng, Jiaxiong Zeng, Zihe Wang, Fei Liu, Lu Ma, Min Zhou, Shanshan Zhao, Bo Wu, Cheng Wang, Qingyun Yan, Zhili He, Longfei Shu*. Protozoa as Hotspots for Potential Pathogens in the Drinking Water of a Subtropical Megacity: Diversity, Treatment, and Health Risk. Environmental Science & Technology, 2023, 57(15): 6108-6118.
  2. Liping Wang, Yingwen Mai, Shenzhou Li, Longfei Shu*, Jingyun Fang*. Efficient inactivation of amoeba spores and their intraspore bacteria by solar/chlorine: Kinetics and mechanisms. Water Research, 2023,242: 120288.
  3. Zihe Wang, Wei Huang, Yingwen Mai, Yuehui Tian, Bo Wu, Cheng Wang, Qingyun Yan, Zhili He, Longfei Shu*. Environmental stress promotes the persistence of facultative bacterial symbionts in amoebae. Ecology and Evolution, 2023, 13 (3), e9899.
  4. Zihe Wang, Wei Huang, Zhiwei Liu, Jiaxiong Zeng, Zhili He, Longfei Shu*. The neonicotinoid insecticide imidacloprid has unexpected effects on the growth and development of soil amoebae. Science of The Total Environment, 2023, 869: 161884.
  5. Liping Wang, Yingwen Mai, Shenzhou Li, Longfei Shu, Jingyun Fang. Breakpoint Chlorination Enhances the Disinfection of Amoeba Spores and Their Intraspore Bacteria. Environmental Science & Technology Letters, 2023, 10(3): 267-273.
  6. Xiaoli Yu, Qichao Tu, Jihua Liu, Yisheng Peng, Cheng Wang, Fanshu Xiao, Yingli Lian, Xueqin Yang, Ruiwen Hu, Huang Yu, Lu Qian, Daoming Wu, Ziying He, Longfei Shu, Qiang He, Yun Tian, Faming Wang, Shanquan Wang, Bo Wu, Zhijian Huang, Jianguo He, Qingyun Yan, Zhili He. Environmental selection and evolutionary process jointly shape genomic and functional profiles of mangrove rhizosphere microbiomes. mLife, 2023, 2(3), 253-266.
  7. Jiaxiong Zeng, Yu Pan, Ruiwen Hu, Fei Liu, Hang Gu, Jijuan Ding, Songfeng Liu, Shengwei Liu, Xueqin Yang, Yisheng Peng, Yun Tian, Qiang He, Yongjie Wu, Qingyun Yan, Longfei Shu, Zhili He*, Cheng Wang*. The vertically-stratified resistomes in mangrove sediments was driven by the bacterial diversity. Journal of Hazardous Materials, 2023, 131974.
  8. Lu Qian, Xiaoli Yu, Hang Gu, Fei Liu, Yijun Fan, Cheng Wang, Qiang He, Yun Tian, Yisheng Peng, Longfei Shu, Shanquan Wang, Zhijian Huang, Qingyun Yan, Jianguo He, Guangli Liu, Qichao Tu, Zhili He. Vertically stratified methane, nitrogen and sulphur cycling and coupling mechanisms in mangrove sediment microbiomes. Microbiome, 2023, 11(1): 1-19.
  9. Meng-Yuan Li, Run-Dong Zhang, Yi-Xing Lin, Qi-Wen Li, Qiu-Yue Zhao, Zong-Xi Zhao, Zhong-Ming Ling, Longfei Shu, Min Zhang, Li-Xin Hu, Yi-Jing Shi, Guang-Guo Ying. Biotransformation of sulfamonomethoxine in a granular sludge system: Pathways and mechanisms. Chemosphere, 2023, 313: 137508.
  10. Erxin Su, Yongjie Wu, Pubo Chen, Huang Yu, Shengwei Liu, Hongtian Luo, Yufeng Yang, Cheng Wang, Longfei Shu, Bo Wu, Zhili He, Qingyun Yan. Dietary selenium regulates the diversity and stability of microbial communities in stomach and intestine of rabbitfish (Siganus oramin). Aquaculture, 2023, 563: 738979.
  11. Min Zhou, Xiaotong Guan, Ting Deng, Ruiwen Hu, Lu Qian, Xueqin Yang, Bo Wu, Juan Li, Qiang He, Longfei Shu, Qingyun Yan, Zhili He. Synthetic phylogenetically diverse communities promote denitrification and stability. Environmental Research, 2023, 231: 116184.
  12. Ruiwen Hu, Songfeng Liu, Haiming Zhao, Zhigang Wang, Longfei Shu, Jiaxiong Zeng, Quanying Cai, Cehui Mo, Zhili He, Cheng Wang. Temporal microbial succession drives phase-dependent kinetics of di (2-ethylhexyl) phthalate biodegradation in soil. Biology and Fertility of Soils, 2023, 1-18.
  13. Bo Wu, Xiaotong Guan, Ting Deng, Xueqin Yang, Juan Li, Min Zhou, Cheng Wang, Shanquan Wang, Qingyun Yan, Longfei Shu, Qiang He, Zhili He. Synthetic Denitrifying Communities Reveal a Positive and Dynamic Biodiversity-Ecosystem Functioning Relationship during Experimental Evolution. Microbiology Spectrum, 2023, e04528-22.
  14. Xiaoli Yu, Lu Qian, Qichao Tu, Yisheng Peng, Cheng Wang, Daoming Wu, Ziying He, Longfei Shu, Qiang He, Yun Tian, Kedong Yin, Shanquan Wang, Qingyun Yan, Qiuping Zhong, Zhili He. Chemoautotrophic sulphur oxidizers dominate microbial necromass carbon formation in coastal blue carbon ecosystems. Functional Ecology, 2023, 37(10), 2634-2651.

2022

  1. Siyi Zhang, Zhenzhen He, Chenyuan Wu, Zihe Wang, Yingwen Mai, Ruiwen Hu, Xiaojie Zhang, Wei Huang, Yuehui Tian, Dehua Xia, Cheng Wang, Qingyun Yan, Zhili He*, Longfei Shu*. Complex Bilateral Interactions Determine the Fate of Polystyrene Micro-and Nanoplastics and Soil Protists: Implications from a Soil Amoeba. Environmental Science & Technology, 2022, 56(8): 4936-4949.
  2. Huang Yu#, Zhenzhen He#, Zhili He, Qingyun Yan*, Longfei Shu*. Soil amoebae affect iron and chromium reduction through preferential predation between two metal-reducing bacteria. Environmental Science & Technology, 2022, 56, 12, 9052–9062.
  3. Zhenzhen He; Ningchao Zheng; Lin Zhang; Yuehui Tian; Zhuofeng Hu*; Longfei Shu*. Efficient inactivation of intracellular bacteria in dormant amoeba spores by FeP. Journal of Hazardous Materials, 2022, 425, 127996.
  4. Chenyuan Wu; Yuanqing Chao; Longfei Shu*; Rongliang Qiu*. Interactions Between Soil Protists and Pollutants: An Unsolved Puzzle. Journal of Hazardous Materials, 2022, 429, 128279.
  5. Yuehui Tian, Tao Peng, Zhenzhen He, Luting Wang, Xurui Zhang, Zhili He, Longfei Shu*. Symbiont-Induced Phagosome Changes Rather than Extracellular Discrimination Contribute to the Formation of Social Amoeba Farming Symbiosis. Microbiology Spectrum, 2022, e01727-21.
  6. Yingxue Xuan, Yingwen Mai, Yunqiu Xu, Jianyi Zheng, Zhili He, Longfei Shu*, Yingjie Cao*. Enhanced microbial nitrification-denitrification processes in a subtropical metropolitan river network. Water Research, 2022, 222: 118857.
  7. Xiafei Zheng, Zhili He, Cheng Wang, Qingyun Yan*, Longfei Shu*. Evaluation of different primers of the 18S rRNA gene to profile amoeba communities in environmental samples. Water Biology and Security, 2022, 100057.
  8. Dandan Zhang, Mingyue Li, Yuchun Yang, Huang Yu, Fanshu Xiao, Chengzhi Mao, Jie Huang, Yuhe Yu, Yunfeng Wang, Bo Wu, Cheng Wang, Longfei Shu, Zhili He, Qingyun Yan. Nitrite and nitrate reduction drive sediment microbial nitrogen cycling in a eutrophic lake. Water Research, 2022, 118637.
  9. Mengge Fan, Longfei Shu, Xinran Zhang, Miao Yu, Yongting Du, Junlang Qiu, Xin Yang. Synergistic cytotoxicity of binary combinations of inorganic and organic disinfection byproducts assessed by real-time cell analysis. Journal of Environmental Sciences. 2022, 117, 222-231.
  10. Jiaxiong Zeng, Qichao Tu, Xiaoli Yu, Lu Qian, Cheng Wang, Longfei Shu, Fei Liu, Shengwei Liu, Zhijian Huang, Jianguo He, Qingyun Yan*, Zhili He*. PCycDB: a comprehensive and accurate database for fast analysis of phosphorus cycling genes. Microbiome, 2022, 10(1): 101.
  11. Chao Jin, Yijun Mo, Lingan Zhao, Zihan Xiao, Shishu Zhu, Zhenzhen He, Zijian Chen, Miaoyue Zhang, Longfei Shu, Rongliang Qiu. Host–Endosymbiont Relationship Impacts the Retention of Bacteria-Containing Amoeba Spores in Porous Media. Environmental Science & Technology, 2022, 56(17): 12347-12357.
  12. Wu, Bo; Zhou, Luhong; Liu, Shangshi; Liu, Feifei; Saleem, Muhammad; Han, Xingguo; Shu, Longfei; Yu, Xiaoli; Hu, Ruiwen; He, Zhili. Biogeography of soil protistan consumer and parasite is contrasting and linked to microbial nutrient mineralization in forest soils at a wide-scale. Soil Biology and Biochemistry, 2022, 165, 108513.
  13. Huang Yu, Xizhe Yan, Wanlin Weng, Sihan Xu, Guizhi Xu, Tianyuan Gu, Xiaotong Guan, Shengwei Liu, Pubo Chen, Yongjie Wu, Fanshu Xiao, Cheng Wang, Longfei Shu, Bo Wu, Dongru Qiu, Zhili He, Qingyun Yan. Extracellular proteins of Desulfovibrio vulgaris as adsorbents and redox shuttles promote biomineralization of antimony. Journal of Hazardous Materials, 2022, 426, 127795.
  14. Lu Qian, Xiaoli Yu, Jiayin Zhou, Hang Gu, Jijuan Ding, Yisheng Peng, Qiang He, Yun Tian, Jihua Liu, Shanquan Wang, Cheng Wang, Longfei Shu, Qingyun Yan, Jianguo He, Guangli Liu, Qichao Tu, Zhili He. MCycDB: a curated database for comprehensively profiling methane cycling processes of environmental microbiomes. Molecular Ecology Resources, 2022, 22(5): 1803-1823.
  15. Zhuoyun Tang, Ran Yin, Wei Qu, Huadan Liu, Huijun Luo, Dehua Xia, Yajing Huang, Longfei Shu, Chun He. 2022. Flower Pollen-Based Photosensitization Process for Enhanced Solar Disinfection of Drinking Water: Reactor Design and Inactivation Mechanisms. ACS ES&T Engineering, 2022, 2 (4), 629-641.
  16. Huang Yu, Qiuping Zhong, Yisheng Peng, Xiafei Zheng, Fanshu Xiao, Bo Wu, Xiaoli Yu, Zhiwen Luo, Longfei Shu, Cheng Wang, Qingyun Yan, Zhili He. Environmental Filtering by pH and Salinity Jointly Drives Prokaryotic Community Assembly in Coastal Wetland Sediments. Frontiers in Marine Science, 2022, 1980.
  17. Fanshu Xiao, Wengen Zhu, Yuhe Yu, Jie Huang, Juan Li, Zhili He, Jianjun Wang, Huaqun Yin, Huang Yu, Shengwei Liu, Pubo Chen, Zhijian Huang, Jianguo He, Cheng Wang, Longfei Shu, Qingyun Yan. Interactions and Stability of Gut Microbiota in Zebrafish Increase with Host Development. Microbiology Spectrum, 2022, e01696-21.
  18. Xueqin Yang, Xiaoli Yu, Qiang He, Ting Deng, Xiaotong Guan, Yingli Lian, Kui Xu, Longfei Shu, Cheng Wang, Qingyun Yan, Yuchun Yang, Bo Wu, Zhili He. Niche differentiation among comammox (Nitrospira inopinata) and other metabolically distinct nitrifiers. Frontiers in Microbiology, 2022, 3368.
  19. Ruiwen Hu, Songfeng Liu, Muhammad Saleem, Zhiyao Xiong, Zhengyuan Zhou, Zhiwen Luo, Longfei Shu, Zhili He, Cheng Wang. Environmentally‐induced reconstruction of microbial communities alters particulate carbon flux of deep chlorophyll maxima in the South China sea. Functional Ecology, 2022, 36(10): 2493-2507.

2021

  1. Chao Jin, Lingan Zhao, Weigao Zhao, Luting Wang, Shishu Zhu, Zihan Xiao, Yijun Mo, Miaoyue Zhang, Longfei Shu*, Rongliang Qiu*. Transport and Retention of Free-Living Amoeba Spores in Porous Media: Effects of Operational Parameters and Extracellular Polymeric Substances. Environmental Science & Technology,2021, 55(13), 8709-8720.
  2. Zhenzhen He, Luting Wang, Yuexian Ge, Siyi Zhang, Yuehui Tiana, Xin Yang*, Longfei Shu*. Both viable and inactivated amoeba spores protect their intracellular bacteria from drinking water disinfection. Journal of Hazardous Materials, 2021, 417, 126006.
  3. Longfei Shu, Zhenzhen He, Xiaotong Guan, Xueqin Yang, Yuehui Tian, Siyi Zhang, Chenyuan Wu, Zhili He, Qingyun Yan, Cheng Wang*, Yijing Shi*. A dormant amoeba species can selectively sense and predate on different soil bacteria. Functional Ecology, 2021, 35(8): 1708-1721.(封面論文).
  4. Yijing Shi, David C. Queller, Yuehui Tian, Siyi Zhang, Qingyun Yan, Zhili He, Zhenzhen He, Chenyuan Wu, Cheng Wang*, Longfei Shu*. The ecology and evolution of amoeba-bacterium interactions. Applied and Environmental Microbiology, 2021, 87(2): e01866-20. (封面論文)
  5. Cheng Wang, Ruiwen Hu, PJ Strong, Wei Zhuang, Weiming Huang, Zhiwen Luo, Qingyun Yan, Zhili He, Longfei Shu*. Prevalence of Antibiotic Resistance Genes and Bacterial Pathogens along the Soil–Mangrove Root Continuum. Journal of Hazardous Materials, 2021, 408: 124985.
  6. Liping Wang, Chengsong Ye, Lizheng Guo, Chunyan Chen, Xiujuan Kong, Yaoqing Chen, Longfei Shu, Peng Wang, Xin Yu*, and Jingyun Fang*. Assessment of the UV/Chlorine Process in the Disinfection of Pseudomonas aeruginosa: Efficiency and Mechanism. Environmental Science & Technology, 2021, 55(13): 9221-9230.
  7. Ruiwen Hu, Haiming Zhao, Xihui Xu, Zhigang Wang, Ke Yue, Longfei Shu, Qingyun Yan, Bo Wu, Cehui Mo, Zhili He, ChengWang. Bacteria-driven phthalic acid ester biodegradation: Current status and emerging opportunities. Environment International, 2021, 154: 106560.
  8. Huang Yu, Xiafei Zheng, Wanlin Weng, Xizhe Yan, Pubo Chen, Xingyu Liu, Tao Peng, Qiuping Zhong, Kui Xu, Cheng Wang, Longfei Shu, Tony Yang, Fanshu Xiao, Zhili He, Qingyun Yan. Synergistic effects of antimony and arsenic contaminations on bacterial, archaeal and fungal communities in the rhizosphere of Miscanthus sinensis: Insights for nitrification and carbon mineralization. Journal of Hazardous Materials, 2021, 411, 125094.
  9. Huang Yu, Xingyu Liu, Chao Yang, Yisheng Peng, Xiaoli Yu, Hang Gu, Xiafei Zheng, Cheng Wang, Fanshu Xiao, Longfei Shu, Zhili He, Bo Wu, Qingyun Yan. Co-symbiosis of arbuscular mycorrhizal fungi (AMF) and diazotrophs promote biological nitrogen fixation in mangrove ecosystems. Soil Biology and Biochemistry, 2021, 161, 108382.
  10. Fanshu Xiao, Wengen Zhu, Yuhe Yu, Zhili He, Bo Wu, Cheng Wang, Longfei Shu, Xinghao Li, Huaqun Yin, Jianjun Wang, Philippe Juneau, Xiafei Zheng, Yongjie Wu, Juan Li, Xiaojuan Chen, Dongwei Hou, Zhijian Huang, Jianguo He, Guohuan Xu, Liwei Xie, Jie Huang, Qingyun Yan. 2021. Host development overwhelms environmental dispersal in governing the ecological succession of zebrafish gut microbiota. npj Biofilms and Microbiomes, 2021, 7(1): 5.
  11. Xiafei Zheng, Keke Zhang, Tony Yang, Zhili He, Longfei Shu, Fanshu Xiao, Yongjie Wu, Binhao Wang, Huang Yu, Qingyun Yan. Sediment resuspension drives protist metacommunity structure and assembly in grass carp (Ctenopharyngodon idella) aquaculture ponds. Science of the Total Environment, 2020, 764: 142840.
  12. Kui Xu, Zhou Li, Philippe Juneau, Fanshu Xiao, Yingli Lian, Wei Zhang, Longfei Shu, Haibo Jiang, Keke Zhang, Cheng Wang, Shanquan Wang, Qingyun Yan, Zhili He. Toxic and protective mechanisms of cyanobacterium Synechocystis sp. in response to titanium dioxide nanoparticles. Environmental Pollution, 2021, 274: 116508.
  13. Yuexian Ge, Xinran Zhang, Longfei Shu, Xin Yang. Kinetics and Mechanisms of Virus Inactivation by Chlorine Dioxide in Water Treatment: A Review. Bulletin of environmental contamination and toxicology, 2021, 106: 560-567.

2020

  1. Longfei Shu*, Xinye Qian, Debra A. Brock, Katherine S. Geist, David C. Queller, Joan E. Strassmann. Loss and resiliency of social amoeba symbiosis under simulated warming. Ecology and Evolution, 2020, 10: 13182-13189.
  2. Wu, Bo, Feifei Liu, Aifen Zhou, Juan Li, Longfei Shu, Megan L. Kempher, Xueqin Yang, Feiyan Pan, Grant M. Zane, Judy D. Wall, Joy D. Van Nostrand, Philippe Juneau, Shouwen Chen, Qingyun Yan, Jizhong Zhou, Zhili He. Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris. The ISME Journal, 2020, 14(11): 2862-2876.
  3. Wei Zhuang, Xiaoli Yu, Ruiwen Hu, Zhiwen Luo, Xingyu Liu, Xiafei Zheng, Fanshu Xiao, Yisheng Peng, Qiang He, Yun Tian,Tony Yang, Shanquan Wang, Longfei Shu, Qingyun Yan, Cheng Wang, Zhili He. Diversity, function and assembly of mangrove root-associated microbial communities at a continuous fine-scale. npj Biofilms and Microbiomes, 2020, 6(1): 52.
  4. Xiaoli Yu, Xueqin Yang, Yongjie Wu, Yisheng Peng, Tony Yang, Fanshu Xiao, Qiuping Zhong, Kui Xu, Longfei Shu, Qiang He, Yun Tian, Qingyun Yan, Cheng Wang, Bo Wu, Zhili He. Sonneratia apetala introduction alters methane cycling microbial communities and increases methane emissions in mangrove ecosystems. Soil Biology and Biochemistry, 2020, 144: 107775.
  5. Keke Zhang, Xiafei Zheng, Zhili He, Tony Yang, Longfei Shu, Fanshu Xiao, Yongjie Wu, Binhao Wang, Zhou Li, Pubo Chen, Qingyun Yan. Fish growth enhances microbial sulfur cycling in aquaculture pond sediments. Microbial Biotechnology, 2020, 13: 1597-1610.
  6. Yuexian Ge, Yu Lei, Xin Lei, Wenhui Gan, Longfei Shu, Xin Yang. Exploration of reaction rates of chlorine dioxide with tryptophan residue in oligopeptides and proteins. Journal of Environmental Sciences, 2020, 93: 129-136.
  7. Yongjie Wu, Fanshu Xiao, Cheng Wang, Longfei Shu, Xiafei Zheng, Kui Xu, Xiaoli Yu, Keke Zhang, Hongtian Luo, Yufeng Yang, Zhili He, Qingyun Yan. The Beta- Diversity of Siganus fuscescens-Associated Microbial Communities from Different Habitats Increases with Body Weight. Frontiers in Microbiology, 2020, 11: 1562.
  8. Huang Yu, Xizhe Yan, Xiafei Zheng, Kui Xu, Qiuping Zhong, Tony Yang, Feifei Liu, Cheng Wang, Longfei Shu, Zhili He, Fanshu Xiao, Qingyun Yan. Differential distribution of and similar biochemical responses to different species of arsenic and antimony in Vetiveria zizanioides. Environmental Geochemistry and Health, 2020, 42: 3995-4010.
  9. Zhou Li, Philippe Juneau, Yingli Lian, Wei Zhang, Shanquan Wang, Cheng Wang, Longfei Shu, Qingyun Yan, Zhili He, Kui Xu. Effects of Titanium Dioxide Nanoparticles on Photosynthetic and Antioxidative Processes of Scenedesmus obliquus. Plants, 2020, 9(12), 1748.
  10. Xiaoli Yu, Jiayin Zhou, Wen Song, Mengzhao Xu, Qiang He, Yisheng Peng, Yun Tian, Cheng Wang, Longfei Shu, Shanquan Wang, Qingyun Yan, Jihua Liu, Qichao Tu, Zhili He. SCycDB: A curated functional gene database for metagenomic profiling of sulphur cycling pathways. Molecular Ecology Resources. 2021, 21(3): 924-940.
  11. 彭濤, 張斯儀, 王璐婷, 何祯珍, 舒龍飛*.阿米巴-細菌互作：進化、生态與環境效應. 微生物學報 2020, 60: 864-874.

2018

  1. Longfei Shu#, Debra A Brock#, Katherine S Geist, Jacob W Miller, David C Queller, Joan E Strassmann, Susanne DiSalvo. Symbiont location, host fitness, and possible coadaptation in a symbiosis between social amoebae and bacteria.eLife, 2018, 7: e42660.
  2. Longfei Shu*, Bojie Zhang, David Queller, Joan Strassmann. Burkholderia bacteria use chemotaxis to find social amoeba Dictyostelium discoideum hosts. The ISME Journal, 2018, 12:1977-1993.
  3. Longfei Shu*, Jie Qiu and Katja Räsänen. Do novo oviduct transcriptomics of the moor frog (Rana arvalis): a quest for maternal effect candidate genes. PeerJ, 2018, 6:e5452.

Before 2018

  1. Joan Strassmann and Longfei Shu. Ancient bacteria-amoeba relationships and pathogenic animal bacteria. PLOS Biology, 2017 15(5).
  2. Longfei Shu, Marc J-F Suter, Anssi Laurila and Katja Räsänen. Molecular phenotyping of maternal egg jelly reveals parallel adaptive evolution to acidity in Rana arvalis and Rana temporaria. Molecular Ecology2016, 25(18):4564-4579.
  3. Longfei Shu, Anssi Laurila, and Katja Räsänen. Acid stress mediated adaptive divergence in ion channel function during embryogenesis in Rana arvalis. Scientific Reports,2015,doi: 10.1038/srep14201.
  4. Longfei Shu, Marc J.-F. Suterand Katja Räsänen. Evolution of egg coats: linking molecular biology and ecology. Molecular Ecology, 2015, 24: 4052-4073.
  5. Longfei Shu, Anssi Laurila, Marc J-F Suter and Katja Räsänen. Mechanistic basis of adaptive maternal effects: egg jelly water balance mediates embryonic adaptation to acidity in Rana arvalis. Oecologia, 2015, 179(3):617-628.
  6. Hui Li, Li Zhang, Longfei Shu, Xiaoshan Zhuang, Yanmei Liu, Jun Chen, Zhangli Hu. Sustainable photosynthetic H2-production mediated by artificial miRNA silencing of OEE2 gene in green alga Chlamydomonas reinhardtii. International Journal of Hydrogen Energy, 2015, 40(16): 5609-5616.
  7. Longfei Shu and Zhangli Hu*. Characterization and differential expression of microRNAs elicited by sulfur deprivation in Chlamydomonas reinhardtii. BMC Genomics, 2012 13:108.
  8. 胡章立，舒龍飛，苟德明. 萊茵衣藻硫脅迫相關 microRNA 檢測及其靶基因分析. 深圳大學學報: 理工版, 2011, 28(3): 237-242.
  9. Longfei Shu, Zhangli Hu*. Small silencing RNAs in Chlamydomonas reinhardtii. Minerva Biotecnologica, 2010, 22(1): 29-37.

 

人才培養

  • 畢業生主要就職于科研院所、國家機關、事業單位、央國企等。
  • 田躍輝，博士後，2022年入職廣州大學副教授
  • 何祯珍，2019級研究生，國家獎學金（2021年度），美國喬治華盛頓大學讀博
  • 張琳，2023屆級本科生，校級優秀本科畢業論文
  • 鄭堅儀，2023屆級本科生，校級優秀畢業生
  • 指導本科生在ES&T、WR等雜志發表SCI論文十餘篇